matrixdb ibcp.fr

MatrixDB

Biomolecules and interactions Nomenclature. Societies for Matrix Biology. MatrixDB is a freely available database focused on interactions established by extracellular proteins and polysaccharides. MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations. MatrixDB is an active member of the International Molecular Exchange IMEx. As an IMEx member, MatrixDB uses the PSI-MI controlled vocabulary. If you use these data, please cite the fo.

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Understanding Biological Complexity

Our research is aimed at understanding how molecular information can give rise to complex biological behaviour. Using computational methods, we study the organization and dynamics of cellular components within the context of integrated biological systems. Comparative genomics methods are also being applied to provide insights into how these systems may have evolved from the remote origins of life. To see a world in a grain of sand,.

ExPASy SIB Bioinformatics Resource Portal - Home

Sequence sites, features and motifs. ExPASy is the SIB Bioinformatics Resource Portal. In different areas of life sciences including proteomics, genomics, phylogeny, systems biology, population genetics, transcriptomics etc. This service provides topology and parameters for small molecules, for use with CHARMM and GROMAC.

Home IMEx

The International Molecular Exchange Consortium. A non-redundant set of physical molecular interaction data from a broad taxonomic range of organisms. Expertly curated from direct submissions or peer-reviewed journals to a consistent high standard. Available in standard formats MITAB. Provided by a network of participating major public domain databases. Access to a single, unified IMEx dataset.

ComPPI - Main Page

Protein-protein interaction networks are spatially and temporally merged from the results of various experimental and predicting methods. These often ignore localization data, which in turn deteriorates the data quality and its predictive potential. We present ComPPI, the compartmentalized protein-protein interaction database. Which provides qualitative information on the interactions, proteins and their localizations.

NetAligner - fast and accurate alignment of protein interaction networks

Fast and accurate alignment of protein interaction networks. We currently provide complex to interactome. Alignment for all species combinations of H. Pache RA, Céol A, Aloy P. NetAligner A network alignment server to compare complexes, pathways and whole interactomes.

Home - The Glycoscience Network

To hear about new projects, publications and upcoming events. Why a Glycophysics network? The glycophysics network was created to establish strong connections between molecular physics and glycosciences. The goal is to identify the needs and opportunities in both communities, to facilitate interdisciplinary collaborations and to expedite the integration of novel physical tools into glycosciences. Joomla SEF URLs by Artio.

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MatrixDB

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Biomolecules and interactions Nomenclature. Societies for Matrix Biology. MatrixDB is a freely available database focused on interactions established by extracellular proteins and polysaccharides. MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations. MatrixDB is an active member of the International Molecular Exchange IMEx. As an IMEx member, MatrixDB uses the PSI-MI controlled vocabulary. If you use these data, please cite the fo.

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The site had the following in the site, "MatrixDB is a freely available database focused on interactions established by extracellular proteins and polysaccharides." We noticed that the web page stated " MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations." It also stated " MatrixDB is an active member of the International Molecular Exchange IMEx. As an IMEx member, MatrixDB uses the PSI-MI controlled vocabulary. If you use these data, please cite the fo."

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